Stem-loop gga-mir-1769

Accession

MI0007512

Description

Gallus gallus gga-mir-1769 precursor miRNA

Literature search

2 open access papers mention gga-mir-1769
(5 sentences)

Sequence

36 reads, 1 reads per million, 5 experiments

guguggaugugugugguguggcCUUCAGGCUUUUCUCACACCUGuugagcucugcagucaAGUGUGAAAUCUGCCUGAAAGUCauuccaacauucaaauaugc
...(((((((...(((.(((((.(((((((.....((((((((((........))))....)))))).....))))))).))))).)))))))))).......

Structure

----gug       gug   u     C       UUUUC      ----    uga 
       uggaugu   ugg guggc UUCAGGC     UCACAC    CUGu   g
       |||||||   ||| ||||| |||||||     ||||||    ||||    
       acuuaca   acc uaCUG AAGUCCG     AGUGUG    gacg   c
cguauaa       ---   u     A       UCUAA      Aacu    ucu 

Annotation confidence Not enough data

Genome context

chr15: 2239895-2239997 [+]

Mature gga-miR-1769-5p

• Accession: MIMAT0007677
• Description: Gallus gallus gga-miR-1769-5p mature miRNA
• Sequence: 23 - CUUCAGGCUUUUCUCACACCUG - 44
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1769-3p

• Accession: MIMAT0007678
• Description: Gallus gallus gga-miR-1769-3p mature miRNA
• Sequence: 61 - AGUGUGAAAUCUGCCUGAAAGUC - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964