Stem-loop gga-mir-1775

Accession

MI0007518

Description

Gallus gallus gga-mir-1775 precursor miRNA

Sequence

53 reads, 2 reads per million, 2 experiments

guguaugagcucUGAAUGCUUCGUGCAACAGGAAGacaaacaggcuaagcgaguccuUCCUGUAGCCAGAAGAUUCUGAucucugacac
((((..(((.((.((((.((((..((.((((((((.......((((.....)))))))))))).))..)))))))).)).)))..))))

Structure

    au   c  U    G    GU  A        acaaaca    a 
gugu  gag uc GAAU CUUC  GC ACAGGAAG       ggcu a
||||  ||| || |||| ||||  || ||||||||       |||| g
caca  cuc AG CUUA GAAG  CG UGUCCUuc       cuga c
    gu   u  U    -    AC  A        -------    g 

Annotation confidence Not enough data

Genome context

chr5: 2412385-2412473 [+]

Mature gga-miR-1775-3p

• Accession: MIMAT0007686
• Description: Gallus gallus gga-miR-1775-3p mature miRNA
• Sequence: 58 - UCCUGUAGCCAGAAGAUUCUGA - 79
• Evidence: experimental ; Illumina [1-2]

Mature gga-miR-1775-5p

• Accession: MIMAT0026784
• Description: Gallus gallus gga-miR-1775-5p mature miRNA
• Sequence: 13 - UGAAUGCUUCGUGCAACAGGAAG - 35
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45