miRBase entry: gga-mir-1811

Stem-loop gga-mir-1811


Accession
MI0007556
Description
Gallus gallus gga-mir-1811 precursor miRNA

Literature search
1 open access papers mention gga-mir-1811
(2 sentences)

Sequence

gcugacaugguuUAUUGCAGCGCUGGGUGCAUggagaucuucacuuagcgugcacccagcgcugaaauaaccaauguuggc
((((((((((((.(((.((((((((((((((((..((.......))..)))))))))))))))).))))))).))))))))

Structure
        -    U   G                ga  uc 
gcugacau gguu AUU CAGCGCUGGGUGCAUg  ga  u
|||||||| |||| ||| ||||||||||||||||  ||  u
cgguugua ccaa uaa gucgcgacccacgugc  uu  c
        a    -   a                ga  ca 


Annotation confidence Not enough data
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Genome context
chr4: 57456663-57456743 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from gga-mir-1811
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gga-miR-1811

Accession MIMAT0007729
Description Gallus gallus gga-miR-1811 mature miRNA
Sequence 13 - UAUUGCAGCGCUGGGUGCAU - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964