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miRBase |
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Stem-loop sequence gga-mir-458a |
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Accession | MI0007567 (change log) | |||||
Previous IDs | gga-mir-458 | |||||
Description | Gallus gallus miR-458 stem-loop | |||||
Gene family | MIPF0000179; mir-458 | |||||
Literature search |
2 open access papers mention gga-mir-458a | |||||
Stem-loop |
a g cc -----gg gu g cg uc aa c 5' gca ag gc cc ggugca auggcag ccauuu agagcuau acag g ||| || || || |||||| ||||||| |||||| |||||||| |||| u 3' cgu uc cg gg ucaugu uaccguc gguaag ucucgaua uguu c - a ua acaaaaa -- a au uu -c a |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence gga-miR-458a-5p |
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Accession | MIMAT0007745 |
Previous IDs | gga-miR-458* |
Sequence |
30 - agcgccauuuucagagcuaua - 50 |
Deep sequencing | 12 reads, 2 experiments |
Evidence | experimental; Illumina [1] |
Predicted targets |
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Mature sequence gga-miR-458a-3p |
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Accession | MIMAT0007746 |
Previous IDs | gga-miR-458 |
Sequence |
66 - auagcucuuugaaugguacugc - 87 |
Deep sequencing | 146897 reads, 5 experiments |
Evidence | by similarity; MI0002179 |
Database links |
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Predicted targets |
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References |
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1 |
PMID:18469162
"A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach"
Genome Res. 18:957-964(2008).
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2 |
PMID:18511220
"Identification of novel chicken microRNAs and analysis of their genomic organization"
Gene. 418:34-40(2008).
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