Stem-loop mml-mir-9-1

Accession

MI0007584

Description

Macaca mulatta mml-mir-9-1 precursor miRNA

Gene family

MIPF0000014; mir-9

Literature search

2 open access papers mention mml-mir-9-1
(2 sentences)

Sequence

5870566 reads, 33271 reads per million, 9 experiments

cgggguugguuguuaUCUUUGGUUAUCUAGCUGUAUGAgugguguggagucuucAUAAAGCUAGAUAACCGAAAGUAaaaauaacccca
.(((((((....((((.(((((((((((((((.((((((.(.(....).).)))))).))))))))))))))).))))...))))))).

Structure

c       guug    C               G      u g g 
 gggguug    uuaU UUUGGUUAUCUAGCU UAUGAg g u u
 |||||||    |||| ||||||||||||||| |||||| | |  
 ccccaau    aAUG AAGCCAAUAGAUCGA AUAcuu u a g
a       -aaa    A               A      c g g 

Annotation confidence High

Genome context

chr1: 131037358-131037446 [-]

Mature mml-miR-9-5p

• Accession: MIMAT0006160
• Description: Macaca mulatta mml-miR-9-5p mature miRNA
• Sequence: 16 - UCUUUGGUUAUCUAGCUGUAUGA - 38
• Evidence: experimental ; Illumina [2]

Mature mml-miR-9-3p

• Accession: MIMAT0026796
• Description: Macaca mulatta mml-miR-9-3p mature miRNA
• Sequence: 55 - AUAAAGCUAGAUAACCGAAAGUA - 77
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45