miRBase entry: mml-mir-16-2

Stem-loop mml-mir-16-2


Accession
MI0007589
Description
Macaca mulatta mml-mir-16-2 precursor miRNA
Gene family
MIPF0000006; mir-15

Literature search
3 open access papers mention mml-mir-16-2
(4 sentences)

Sequence

69394 reads, 653 reads per million, 9 experiments
guuccacucUAGCAGCACGUAAAUAUUGGCGuagugaaauauguauuaaacaCCAAUAUUACUGUGCUGCUUCAgugugac
(((.((((..(((((((((..((((((((.((((((.......))))..)).))))))))..)))))))))..)))).)))

Structure
   c    cU         UA        C  --    aa 
guu cacu  AGCAGCACG  AAUAUUGG Gu  agug  a
||| ||||  |||||||||  |||||||| ||  ||||  u
cag gugA  UCGUCGUGU  UUAUAACC ca  uuau  a
   u    CU         CA        a  aa    gu 


Annotation confidence High
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Genome context
chr2: 134308544-134308624 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mml-mir-16-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-16-5p

Accession MIMAT0002651
Description Macaca mulatta mml-miR-16-5p mature miRNA
Sequence 10 - UAGCAGCACGUAAAUAUUGGCG - 31
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-miR-16-2-3p

Accession MIMAT0031018
Description Macaca mulatta mml-miR-16-2-3p mature miRNA
Sequence 53 - CCAAUAUUACUGUGCUGCUUCA - 74
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45