Stem-loop mml-mir-132

Accession

MI0007620

Description

Macaca mulatta mml-mir-132 precursor miRNA

Gene family

MIPF0000065; mir-132

Literature search

2 open access papers mention mml-mir-132
(5 sentences)

Sequence

61230 reads, 379 reads per million, 9 experiments

ccgcccccgcgucuccagggcaACCGUGGCUUUCGAUUGUUACUgugggaacuggaggUAACAGUCUACAGCCAUGGUCGccccgcagcacgcccacgcgc
.(((....((((((.(.((((.(((((((((...((((((((((..(....)....))))))))))...))))))))).)))).).)).))))....))).

Structure

c   cccc    -  c a    a         UUC          --gu g 
 cgc    gcgu cu c gggc ACCGUGGCU   GAUUGUUACU    g g
 |||    |||| || | |||| |||||||||   ||||||||||    |  
 gcg    cgca ga g cccG UGGUACCGA   CUGACAAUgg    c a
c   cacc    c  c c    C         CAU          aggu a 

Annotation confidence High

Genome context

chr16: 1943195-1943295 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-132

Mature mml-miR-132-3p

• Accession: MIMAT0006188
• Description: Macaca mulatta mml-miR-132-3p mature miRNA
• Sequence: 59 - UAACAGUCUACAGCCAUGGUCG - 80
• Evidence: experimental ; Illumina [2]

Mature mml-miR-132-5p

• Accession: MIMAT0026816
• Description: Macaca mulatta mml-miR-132-5p mature miRNA
• Sequence: 23 - ACCGUGGCUUUCGAUUGUUACU - 44
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45