miRBase entry: mml-mir-181d

Stem-loop mml-mir-181d


Accession
MI0007647
Description
Macaca mulatta mml-mir-181d precursor miRNA
Gene family
MIPF0000007; mir-181

Literature search
3 open access papers mention mml-mir-181d
(4 sentences)

Sequence

45487 reads, 281 reads per million, 9 experiments
guccccuccccuaggccacagccaaggucacaaucAACAUUCAUUGUUGUCGGUGGGUugugaggaccgaggccagacccaccgggggaugaaugucacuguggcugggccagacacggcuuaaggggaauggggac
(((((((((((((((((...(((..(((((((....(((((((((....((((((((((.((.(........)))))))))))))..)))))))))...))))))).))).......))))).))))))..))))))

Structure
      --      -     ----aca   aa       aucA         GUUG          g  a gac 
gucccc  uccccu aggcc       gcc  ggucaca    ACAUUCAUU    UCGGUGGGUu ug g   c
||||||  |||||| |||||       |||  |||||||    |||||||||    |||||||||| || |    
cagggg  agggga uucgg       cgg  ucggugu    uguaaguag    ggccacccag ac c   g
      ua      a     cacagac   -g       -cac         --gg          -  - gga 


Annotation confidence Not enough data
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Genome context
chr19: 13878707-13878843 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mml-mir-181d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-181d

Accession MIMAT0006217
Description Macaca mulatta mml-miR-181d mature miRNA
Sequence 36 - AACAUUCAUUGUUGUCGGUGGGU - 58
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8