miRBase entry: mml-mir-196b

Stem-loop mml-mir-196b


Accession
MI0007660
Description
Macaca mulatta mml-mir-196b precursor miRNA
Gene family
MIPF0000031; mir-196

Literature search
2 open access papers mention mml-mir-196b
(2 sentences)

Sequence

51944 reads, 387 reads per million, 9 experiments
acuggucggugauuUAGGUAGUUUCCUGUUGUUGGGauccaccuuucucuCGACAGCACGACACUGCCUUCAuua
.......(((((...(((((((.((.(((((((((((..........))))))))))).)).)))))))))))).

Structure
acugguc     uuU       U  C           ucca 
       gguga   AGGUAGU UC UGUUGUUGGGa    c
       |||||   ||||||| || |||||||||||     
       uuACU   UCCGUCA AG ACGACAGCucu    c
------a     ---       C  C           cuuu 


Annotation confidence Not enough data
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Genome context
chr3: 81000144-81000218 [+]

Database links

Mature mml-miR-196b-5p

Accession MIMAT0006229
Description Macaca mulatta mml-miR-196b-5p mature miRNA
Sequence 15 - UAGGUAGUUUCCUGUUGUUGGG - 36
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-miR-196b-3p

Accession MIMAT0026840
Description Macaca mulatta mml-miR-196b-3p mature miRNA
Sequence 51 - CGACAGCACGACACUGCCUUCA - 72
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45