Stem-loop mml-mir-340

Accession

MI0007703

Description

Macaca mulatta mml-mir-340 precursor miRNA

Gene family

MIPF0000191; mir-340

Sequence

43727 reads, 309 reads per million, 9 experiments

uuguaccuggugugaUUAUAAAGCAAUGAGACUGAUUgucauauguuguuugugggaUCCGUCUCAGUUACUUUAUAGCCauaccugguaucuua
..(((((.((((((.((((((((...((((((.((((.(((((.......))))))))).))))))....)))))))).)))))).)))))....

Structure

--uu     u      a        -CAA      U    g     ug 
    guacc ggugug UUAUAAAG    UGAGAC GAUU ucaua  u
    ||||| |||||| ||||||||    |||||| |||| |||||  u
    uaugg ccauaC GAUAUUUC    ACUCUG CUag ggugu  g
auuc     u      C        AUUG      C    -     uu 

Annotation confidence High

Genome context

chr6: 178677219-178677313 [-]

Mature mml-miR-340-5p

• Accession: MIMAT0006281
• Description: Macaca mulatta mml-miR-340-5p mature miRNA
• Sequence: 16 - UUAUAAAGCAAUGAGACUGAUU - 37
• Evidence: experimental ; Illumina [2]

Mature mml-miR-340-3p

• Accession: MIMAT0026854
• Description: Macaca mulatta mml-miR-340-3p mature miRNA
• Sequence: 58 - UCCGUCUCAGUUACUUUAUAGCC - 80
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45