Stem-loop mml-mir-449b

Accession

MI0007748

Description

Macaca mulatta mml-mir-449b precursor miRNA

Gene family

MIPF0000133; mir-449

Sequence

157 reads, 36 reads per million, 6 experiments

ugaccugaaucagguAGGCAGUGUAUUGUUAGCUGGCugcuugagucaagucagCAGCCACAACUACCCUGCCACUugcuucuggauaaauucuucu
...((.(((.(((((.(((((.(((..(((.(.((((((((.((......))))))))))))))))).)))))))))).))).))............

Structure

---------uga  u   u     A     U   UU   A C        u  gu 
            cc gaa caggu GGCAG GUA  GUU G UGGCugcu ga  c
            || ||| ||||| ||||| |||  ||| | |||||||| ||   
            gg cuu guUCA CCGUC CAU  CAA C ACCGACga cu  a
ucuucuuaaaua  u   c     -     C   --   - -        -  ga 

Annotation confidence High

Genome context

chr6: 56077784-56077880 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-449b

Mature mml-miR-449b-5p

• Accession: MIMAT0006331
• Description: Macaca mulatta mml-miR-449b-5p mature miRNA
• Sequence: 16 - AGGCAGUGUAUUGUUAGCUGGC - 37
• Evidence: experimental ; Illumina [2]

Mature mml-miR-449b-3p

• Accession: MIMAT0026877
• Description: Macaca mulatta mml-miR-449b-3p mature miRNA
• Sequence: 55 - CAGCCACAACUACCCUGCCACU - 76
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45