miRBase entry: mml-mir-450a-1

Stem-loop mml-mir-450a-1


Accession
MI0007749
Description
Macaca mulatta mml-mir-450a-1 precursor miRNA
Gene family
MIPF0000128; mir-450


Sequence

442 reads, 12 reads per million, 9 experiments
aaaugauacuaaacuguUUUUGCGAUGUGUUCCUAAUAUguacuauaaauauAUUGGGAACAUUUUGCAUGUGUaguuuuguaucaauaua
...((((((.((((((....(((((.(((((((((((((((.......))))))))))))))).)))))....)))))).)))))).....

Structure
--aaa      u      uUUU     U               ac 
     ugauac aaacug    UGCGA GUGUUCCUAAUAUgu  u
     |||||| ||||||    ||||| |||||||||||||||  a
     acuaug uuugaU    ACGUU UACAAGGGUUAuaua  u
auaua      u      GUGU     U               aa 


Annotation confidence Not enough data
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Genome context
chrX: 128512137-128512227 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from mml-mir-450a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-450a-5p

Accession MIMAT0006332
Description Macaca mulatta mml-miR-450a-5p mature miRNA
Sequence 18 - UUUUGCGAUGUGUUCCUAAUAU - 39
Evidence experimental
Illumina [2]

Mature mml-miR-450a-1-3p

Accession MIMAT0026878
Description Macaca mulatta mml-miR-450a-1-3p mature miRNA
Sequence 53 - AUUGGGAACAUUUUGCAUGUGU - 74
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45