Stem-loop mml-mir-454

Accession

MI0007755

Description

Macaca mulatta mml-mir-454 precursor miRNA

Gene family

MIPF0000174; mir-454

Literature search

1 open access papers mention mml-mir-454
(8 sentences)

Sequence

4299 reads, 30 reads per million, 9 experiments

ucuguuuaucaccagauccuagaacccUAUCAAUAUUGUCUCUGCuguguaaauaguucugagUAGUGCAAUAUUGCUUAUAGGGUuuugguguuugggaagaacaaugggcagg
..(((((.((.((((((.((((((((((((((((((((((((.(((((....)))))...)))....)))))))))...)))))))))))).)))))))).))))).........

Structure

-------uc     a  a      c            ---         ----   --U     g 
         uguuu uc ccagau cuagaacccUAU   CAAUAUUGU    CUC   GCugu u
         ||||| || |||||| ||||||||||||   |||||||||    |||   |||||  
         acaag ag gguuug gguuuUGGGAUA   GUUAUAACG    gag   ugaua a
ggacgggua     a  -      u            UUC         UGAU   ucu     a 

Annotation confidence High

Genome context

chr16: 30504551-30504665 [+]

Mature mml-miR-454-3p

• Accession: MIMAT0006338
• Description: Macaca mulatta mml-miR-454-3p mature miRNA
• Sequence: 64 - UAGUGCAAUAUUGCUUAUAGGGU - 86
• Evidence: experimental ; Illumina [2]

Mature mml-miR-454-5p

• Accession: MIMAT0026880
• Description: Macaca mulatta mml-miR-454-5p mature miRNA
• Sequence: 28 - UAUCAAUAUUGUCUCUGC - 45
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45