miRBase entry: mml-mir-488

Stem-loop mml-mir-488


Accession
MI0007762
Description
Macaca mulatta mml-mir-488 precursor miRNA
Gene family
MIPF0000318; mir-488

Literature search
1 open access papers mention mml-mir-488
(1 sentences)

Sequence

4736 reads, 35 reads per million, 9 experiments
gagaaucaucucuCCCAGAUAAUGGCACUCUCAAACaaguuuccaaguuguUUGAAAGGCUAUUUCUUGGUCagaugacucuc
((((.((((((..((.(((.((((((.((.((((((((.((...)).)))))))).))))))))))).))..)))))).))))

Structure
    a      cu  C   U      A  C        g  u 
gaga ucaucu  CC AGA AAUGGC CU UCAAACaa uu  
|||| ||||||  || ||| |||||| || |||||||| || c
cucu aguaga  GG UCU UUAUCG GA AGUUuguu aa  
    c      CU  U   -      -  A        g  c 


Annotation confidence High
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Genome context
chr1: 190531966-190532048 [+]

Database links

Mature mml-miR-488-3p

Accession MIMAT0006348
Description Macaca mulatta mml-miR-488-3p mature miRNA
Sequence 52 - UUGAAAGGCUAUUUCUUGGUC - 72
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-miR-488-5p

Accession MIMAT0026882
Description Macaca mulatta mml-miR-488-5p mature miRNA
Sequence 14 - CCCAGAUAAUGGCACUCUCAAAC - 36
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45