miRBase entry: mml-mir-517a

Stem-loop mml-mir-517a


Accession
MI0007787
Description
Macaca mulatta mml-mir-517a precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

96 reads, 17 reads per million, 3 experiments
cucaugcagugacccucuagauggaagcacugucuguggucuaaaagaaaagAUCGUGCAUCCUUUUAGAGUGUuaccguuugaga
((((.((.(((((.(((((((.(((.((((.((((....(((...)))..)))).)))).))).))))))).))))).)).)))).

Structure
-    u  a     c       u   a    u    gugg   a 
 cuca gc gugac cucuaga gga gcac gucu    ucu  
 |||| || ||||| ||||||| ||| |||| ||||    ||| a
 gagu ug cauUG GAGAUUU CCU CGUG UAga    aga  
a    u  c     U       U   A    C    --aa   a 


Annotation confidence High
Do you think this miRNA is real?

Genome context
chr19: 49059963-49060048 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from mml-mir-517a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-517a

Accession MIMAT0006375
Description Macaca mulatta mml-miR-517a mature miRNA
Sequence 53 - AUCGUGCAUCCUUUUAGAGUGU - 74
Evidence not_experimental

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8