Stem-loop mml-mir-520a

Accession

MI0007799

Description

Macaca mulatta mml-mir-520a precursor miRNA

Gene family

MIPF0000020; mir-515

Sequence

1161 reads, 171 reads per million, 4 experiments

cucaggcugugacccUCCAGAGGGAAGUAUUUUCUguugucugaaggaaaagAAAGUGCUUCCCUUUGGACUGUuucgguuugag
(((((((((.(((..((((((((((((((((((((....(((...)))..))))))))))))))))))))..))).)))))))))

Structure

         u   cc                    guug   g 
cucaggcug gac  UCCAGAGGGAAGUAUUUUCU    ucu  
||||||||| |||  ||||||||||||||||||||    ||| a
gaguuuggc uUG  AGGUUUCCCUUCGUGAAAga    agg  
         u   UC                    --aa   a 

Annotation confidence High

Genome context

chr19: 49034604-49034688 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from mml-mir-520a

Mature mml-miR-520a-3p

• Accession: MIMAT0006388
• Description: Macaca mulatta mml-miR-520a-3p mature miRNA
• Sequence: 53 - AAAGUGCUUCCCUUUGGACUGU - 74
• Evidence: experimental ; Illumina [2]

Mature mml-miR-520a-5p

• Accession: MIMAT0026896
• Description: Macaca mulatta mml-miR-520a-5p mature miRNA
• Sequence: 16 - UCCAGAGGGAAGUAUUUUCU - 35
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45