Stem-loop mml-mir-656

Accession

MI0007899

Description

Macaca mulatta mml-mir-656 precursor miRNA

Gene family

MIPF0000018; mir-154

Sequence

504 reads, 5 reads per million, 9 experiments

cugaaauAGGUUGUCUGUGAGGUGUUCAcuuucuauaugaugAAUAUUAUACAGUCAACCUCUuuccgauaucgaauc
..((((.((((((.(((((.((((((((...((.....)))))))))).))))).)))))).))))............

Structure

----------cu    u      U     A        cuu  u 
            gaaa AGGUUG CUGUG GGUGUUCA   uc a
            |||| |||||| ||||| ||||||||   || u
            cuuU UCCAAC GACAU UUAUAAgu   ag a
cuaagcuauagc    C      U     A        ---  u 

Annotation confidence High

Genome context

chr7: 163400519-163400596 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from mml-mir-656

Mature mml-miR-656-3p

• Accession: MIMAT0006497
• Description: Macaca mulatta mml-miR-656-3p mature miRNA
• Sequence: 43 - AAUAUUAUACAGUCAACCUCU - 63
• Evidence: experimental ; Illumina [2]

Mature mml-miR-656-5p

• Accession: MIMAT0026906
• Description: Macaca mulatta mml-miR-656-5p mature miRNA
• Sequence: 8 - AGGUUGUCUGUGAGGUGUUCA - 28
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45