miRBase entry: mml-mir-660

Stem-loop mml-mir-660


Accession
MI0007901
Description
Macaca mulatta mml-mir-660 precursor miRNA
Gene family
MIPF0000113; mir-188


Sequence

4673 reads, 54 reads per million, 9 experiments
cugcuccuucucccaUACCCAUUGCAUAUCGGAGUUGuaaauucucaaaacACCUCCUGUGUGCAUGGAUUACaggagggugagccuugucaucgug
..((((.((((((.....((((.((((((.((((.(((...........))).)))).))))))))))......)))))).))))............

Structure
----------cu    c      -caUAC    U      C    U   aaau 
            gcuc uucucc      CCAU GCAUAU GGAG UGu    u
            |||| ||||||      |||| |||||| |||| |||    c
            cgag gggagg      GGUA CGUGUG CCUC Aca    u
gugcuacuguuc    u      aCAUUA    -      U    C   aaac 


Annotation confidence Not enough data
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Genome context
chrX: 50020567-50020663 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from mml-mir-660
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-660-5p

Accession MIMAT0006499
Description Macaca mulatta mml-miR-660-5p mature miRNA
Sequence 16 - UACCCAUUGCAUAUCGGAGUUG - 37
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-miR-660-3p

Accession MIMAT0026907
Description Macaca mulatta mml-miR-660-3p mature miRNA
Sequence 52 - ACCUCCUGUGUGCAUGGAUUAC - 73
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45