miRBase entry: mml-mir-940

Stem-loop mml-mir-940


Accession
MI0007936
Description
Macaca mulatta mml-mir-940 precursor miRNA
Gene family
MIPF0000540; mir-940


Sequence

156 reads, 3 reads per million, 7 experiments
guggggugugggcccggccccaggagcggggccugggcagccccguguguugaggaaggAAGGCAGGGCCCCCGCUCCCCgggccugaccccac
(((((((..((((((((.....((((((((((((.(.(..((((.........))..))..).).))).))))))))))))))))).)))))))

Structure
       gu        cccca         -   g g ag  --  gug 
guggggu  gggcccgg     ggagcgggg ccu g c  cc  cc   u
|||||||  ||||||||     ||||||||| ||| | |  ||  ||   g
cacccca  uccgggCC     CCUCGCCCC GGG C G  gg  gg   u
       -g        -----         C   A G AA  aa  agu 


Annotation confidence Not enough data
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Genome context
chr20: 2299673-2299766 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mml-mir-940
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-940

Accession MIMAT0006541
Description Macaca mulatta mml-miR-940 mature miRNA
Sequence 60 - AAGGCAGGGCCCCCGCUCCCC - 80
Evidence not_experimental

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8