miRBase entry: cfa-mir-129-1

Stem-loop cfa-mir-129-1


Accession
MI0008019
Description
Canis familiaris cfa-mir-129-1 precursor miRNA
Gene family
MIPF0000073; mir-129


Sequence

CUUUUUGCGGUCUGGGCUUGCuguuccucucaacaguagucaggaagcccuuaccccaaaaagua
(((((((.(((..((((((.(((..(..((....))..).))).))))))..))).)))))))..

Structure
--       C   CU      G   uu cu  c 
  CUUUUUG GGU  GGGCUU Cug  c  cu a
  ||||||| |||  |||||| |||  |  ||  
  gaaaaac cca  cccgaa gac  g  ga a
au       c   uu      g   -u au  c 


Annotation confidence Not enough data
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Genome context
chr14: 8165110-8165174 [-]

Database links

Mature cfa-miR-129

Accession MIMAT0006623
Description Canis familiaris cfa-miR-129 mature miRNA
Sequence 1 - CUUUUUGCGGUCUGGGCUUGC - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415