miRBase entry: cfa-mir-1307

Stem-loop cfa-mir-1307


Accession
MI0008071
Description
Canis familiaris cfa-mir-1307 precursor miRNA
Gene family
MIPF0000558; mir-1307


Sequence

cgaccggaccucgaccggcucgucuauguugccaaucgACUCGGCGUGGCGUCGGUCGUG
(((((((.((.((.((((.(((..............))).)))))).))..)))))))..

Structure
--       -a  u  a    c   ucuaug 
  cgaccgg  cc cg ccgg ucg      u
  |||||||  || || |||| |||       
  GCUGGCU  GG GC GGCU Agc      u
GU       GC  U  -    C   uaaccg 


Annotation confidence Not enough data
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Genome context
chr28: 15765927-15765986 [-]

Database links

Mature cfa-miR-1307

Accession MIMAT0006665
Description Canis familiaris cfa-miR-1307 mature miRNA
Sequence 39 - ACUCGGCGUGGCGUCGGUCGUG - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415