miRBase entry: cfa-mir-28

Stem-loop cfa-mir-28


Accession
MI0008082
Description
Canis familiaris cfa-mir-28 precursor miRNA
Gene family
MIPF0000057; mir-28


Sequence

aaggagcucacagucuauugaguugccuuucugacuuuccCACUAGAUUGUGAGCUCCUGGA
.((((((((((((((((.((((((........))))....)).))))))))))))))))...

Structure
--a                u  ----    gcc 
   aggagcucacagucua ug    aguu   u
   |||||||||||||||| ||    ||||    
   UCCUCGAGUGUUAGAU AC    ucag   u
AGG                C  ccuu    ucu 


Annotation confidence Not enough data
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Genome context
chr34: 20971517-20971578 [+]

Database links

Mature cfa-miR-28

Accession MIMAT0006675
Description Canis familiaris cfa-miR-28 mature miRNA
Sequence 41 - CACUAGAUUGUGAGCUCCUGGA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415