miRBase entry: cfa-mir-9-1

Stem-loop cfa-mir-9-1


Accession
MI0008125
Description
Canis familiaris cfa-mir-9-1 precursor miRNA
Gene family
MIPF0000014; mir-9


Sequence

UCUUUGGUUAUCUAGCUGUAUGAgugguguggagucuucauaaagcuagauaaccgaaagua
..(((((((((((((((.((((((.(.(....).).)))))).)))))))))))))))....

Structure
--UC               G      u g g 
    UUUGGUUAUCUAGCU UAUGAg g u u
    ||||||||||||||| |||||| | |  
    aagccaauagaucga auacuu u a g
auga               a      c g g 


Annotation confidence Not enough data
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Genome context
chr7: 41509404-41509465 [+]

Database links

Mature cfa-miR-9

Accession MIMAT0006674
Description Canis familiaris cfa-miR-9 mature miRNA
Sequence 1 - UCUUUGGUUAUCUAGCUGUAUGA - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415