miRBase entry: cfa-mir-21

Stem-loop cfa-mir-21


Accession
MI0008165
Description
Canis familiaris cfa-mir-21 precursor miRNA
Gene family
MIPF0000060; mir-21


Sequence

UAGCUUAUCAGACUGAUGUUGAcuguugaaucucauggcaacagcagucgaugggcuguc
(((((((((.(((((.(((((.((((.((...))))))))))).))))))))))))))..

Structure
--         A     A     A    u  a 
  UAGCUUAUC GACUG UGUUG cugu ga  
  ||||||||| ||||| ||||| |||| || u
  gucggguag cugac acaac ggua cu  
cu         -     g     -    -  c 


Annotation confidence Not enough data
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Genome context
chr9: 34340550-34340609 [+]

Database links

Mature cfa-miR-21

Accession MIMAT0006741
Description Canis familiaris cfa-miR-21 mature miRNA
Sequence 1 - UAGCUUAUCAGACUGAUGUUGA - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415