miRBase entry: osa-MIR1847

Stem-loop osa-MIR1847


Accession
MI0008224
Description
Oryza sativa osa-MIR1847 precursor miRNA

Literature search
5 open access papers mention osa-MIR1847
(5 sentences)

Sequence

4 reads, 0 reads per million, 1 experiments
agacucccuaacuuugUGCAGUUUGCAGUUGUGGCACugacauaugggccagacacauuUGGCCCACAUGUUAGUGCCACAACugcaaacuacauaaagucaggggaucu
(((.(((((.((((((((.((((((((((((((((((((((((.(((((((((....))))))))).)))))))))))))))))))))))).)))))))).))))).)))

Structure
   c     a        C                        a         c 
aga ucccu acuuugUG AGUUUGCAGUUGUGGCACugacau ugggccaga a
||| ||||| |||||||| |||||||||||||||||||||||| |||||||||  
ucu gggga ugaaauac ucaaacguCAACACCGUGAUUGUA ACCCGGUuu c
   a     c        a                        C         a 


Annotation confidence Not enough data
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Genome context
Chr1: 20332878-20332987 [+]

Database links

Mature osa-miR1847.1

Accession MIMAT0007766
Description Oryza sativa osa-miR1847.1 mature miRNA
Sequence 17 - UGCAGUUUGCAGUUGUGGCAC - 37
Evidence experimental
454 [1]

Mature osa-miR1847.2

Accession MIMAT0007767
Description Oryza sativa osa-miR1847.2 mature miRNA
Sequence 60 - UGGCCCACAUGUUAGUGCCACAAC - 83
Evidence experimental
454 [1]

References

  1. PubMed ID: 18687877
    A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
    "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
    "Genome Res (2008) 18:1456-1465