miRBase entry: osa-MIR1848

Stem-loop osa-MIR1848


Accession
MI0008225
Description
Oryza sativa osa-MIR1848 precursor miRNA

Literature search
9 open access papers mention osa-MIR1848
(15 sentences)

Sequence

4 reads, 3 reads per million, 2 experiments
ccgcgggcccCCUCGCCGGCGCGCGCGUGCAggugugcgcgcggccgucgaguggcuccuagg
((..(((((..((((.((((.(((((((((....))))))))))))).)))).)))))...))

Structure
  -gc     cC    C    G         A 
cc   gggcc  CUCG CGGC CGCGCGUGC g
||   |||||  |||| |||| |||||||||  
gg   cucgg  gagc gccg gcgcgcgug g
  auc     -u    u    -         u 


Annotation confidence Not enough data
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Genome context
Chr4: 18131807-18131869 [+]

Database links

Mature osa-miR1848

Accession MIMAT0007768
Description Oryza sativa osa-miR1848 mature miRNA
Sequence 11 - CCUCGCCGGCGCGCGCGUGCA - 31
Evidence experimental
454 [1]

References

  1. PubMed ID: 18687877
    A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
    "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
    "Genome Res (2008) 18:1456-1465