miRBase entry: osa-MIR1882g

Stem-loop osa-MIR1882g


Accession
MI0008294
Description
Oryza sativa osa-MIR1882g precursor miRNA
Gene family
MIPF0000571; MIR1882


Sequence

1 reads, 1 reads per million, 1 experiments
uuuaucguuaccaacauccuAGAUUGCUUUCAAGGUCAUUUCUUuauggaccccauucccauaaauucaguauccaaagaugguugcuguaucuaugggaauaaggguuccauaacgaaaugaucuuggacgcaaucuaggaguuugcugaugauaac
.(((((((((.(((..(((((((((((.((((((((((((((.(((((((.((((((((((((.((.(((((.(((....))).))))).)).)))))))))..))).))))))).)))))))))))))).)))))))))))..))).))))))))).

Structure
u         c   ca           U              U       c   --         a  u     u   a 
 uuaucguua caa  uccuAGAUUGC UUCAAGGUCAUUUC Uuaugga ccc  auucccaua au cagua cca a
 ||||||||| |||  ||||||||||| |||||||||||||| ||||||| |||  ||||||||| || ||||| |||  
 aauaguagu guu  aggaucuaacg agguucuaguaaag aauaccu ggg  uaaggguau ua gucgu ggu g
c         c   ug           c              c       u   aa         c  u     u   a 


Annotation confidence Not enough data
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Genome context
Chr11: 20828609-20828766 [+]

Database links

Mature osa-miR1882g

Accession MIMAT0007845
Description Oryza sativa osa-miR1882g mature miRNA
Sequence 21 - AGAUUGCUUUCAAGGUCAUUUCUU - 44
Evidence experimental
454 [1]

References

  1. PubMed ID: 18687877
    A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
    "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
    "Genome Res (2008) 18:1456-1465