miRBase entry: aga-mir-87

Stem-loop aga-mir-87


Accession
MI0008308
Description
Anopheles gambiae aga-mir-87 precursor miRNA
Gene family
MIPF0000152; mir-87


Sequence

gauuucucucggcccagccugaaauuugcuaaaccugauacguguucgaaaccaaGGUGAGCAAAUAUUCAGGUGUgucgacgagcggucacauucgucg
((((.((((((((...((((((((((((((..((((....((....))......)))).))))))).)))))))..))))).))).))))..........

Structure
----------    u   -     cca       -       aa    --gaua  u 
          gauu cuc ucggc   gccugaa auuugcu  accu      cg g
          |||| ||| |||||   ||||||| |||||||  ||||      ||  
          cugg gag agcug   UGGACUU UAAACGA  UGGa      gc u
gcugcuuaca    c   c     -UG       A       -G    accaaa  u 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
This mature miRNA was cloned from Anopheles stepheni, and mapped to the A. gambiae genome [1].

Genome context
chrX: 261172-261271 [-]

Database links

Mature aga-miR-87

Accession MIMAT0007858
Description Anopheles gambiae aga-miR-87 mature miRNA
Sequence 56 - GGUGAGCAAAUAUUCAGGUGU - 76
Evidence not_experimental

References

  1. PubMed ID: 18500992
    Cloning, characterization, and expression of microRNAs from the Asian malaria mosquito, Anopheles stephensi
    Mead EA, Tu Z
    BMC Genomics (2008) 9:244