miRBase entry: aga-mir-1891

Stem-loop aga-mir-1891


Accession
MI0008312
Description
Anopheles gambiae aga-mir-1891 precursor miRNA
Gene family
MIPF0000857; mir-1891

Literature search
2 open access papers mention aga-mir-1891
(4 sentences)

Sequence

gccuccucuuuuuccgucauguUGAGGAGUUAAUUUGCGUGUUUUuauauuugauuaaacacguccauuaacucugguacaugaugguaaaagcgagcaac
((.((..(((((.(((((((((...(((((((((..((((((((............))))))))..)))))))))...))))))))).))))).))))...

Structure
---  c  cu     u         UGA         UU        Uuaua 
   gc uc  cuuuu ccgucaugu   GGAGUUAAU  GCGUGUUU     u
   || ||  ||||| |||||||||   |||||||||  ||||||||      
   cg ag  gaaaa gguaguaca   ucucaauua  ugcacaaa     u
caa  -  -c     u         ugg         cc        uuagu 


Annotation confidence Not enough data
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Comments
This mature miRNA was cloned from Anopheles stepheni, and mapped to the A. gambiae genome [1].

Genome context
chr3R: 5819038-5819138 [-]

Database links

Mature aga-miR-1891

Accession MIMAT0007862
Description Anopheles gambiae aga-miR-1891 mature miRNA
Sequence 23 - UGAGGAGUUAAUUUGCGUGUUUU - 45
Evidence not_experimental

References

  1. PubMed ID: 18500992
    Cloning, characterization, and expression of microRNAs from the Asian malaria mosquito, Anopheles stephensi
    Mead EA, Tu Z
    BMC Genomics (2008) 9:244