Stem-loop ptr-mir-1-1

Accession

MI0008412

Description

Pan troglodytes ptr-mir-1-1 precursor miRNA

Gene family

MIPF0000038; mir-1

Sequence

gggaaacauacuucuuuauaugcccauauggaccugcuaagcuaUGGAAUGUAAAGAAGUAUGUAUcuca
((((.((((((((((((((((..((((((((.....)))...))))).)))))))))))))))).)))).

Structure

-    a                gc     ---   a 
 ggga acauacuucuuuauau  ccaua   ugg c
 |||| ||||||||||||||||  |||||   ||| c
 cucU UGUAUGAAGAAAUGUA  GGUau   auc u
a    A                -A     cga   g 

Annotation confidence Not enough data

Genome context

chr20: 64662320-64662389 [+]

Mature ptr-miR-1

• Accession: MIMAT0007946
• Description: Pan troglodytes ptr-miR-1 mature miRNA
• Sequence: 45 - UGGAAUGUAAAGAAGUAUGUAU - 66
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70