miRBase entry: ptr-mir-1298

Stem-loop ptr-mir-1298


Accession
MI0008502
Description
Pan troglodytes ptr-mir-1298 precursor miRNA
Gene family
MIPF0000598; mir-1298


Sequence

gacgaggaguuaagagUUCAUUCGGCUGUCCAGAUGUAuccaaguacccuguguuauuuggcaauaaauacaucugggcaacugacugaacuuuucacuuuucaugacuca
...(((((((.(((((((((.((((.((((((((((((((((((((........)))))))......))))))))))))).)))).))))))))).)))))))........

Structure
-----gac       u         U    C             ------       ccc 
        gaggagu aagagUUCA UCGG UGUCCAGAUGUAu      ccaagua   u
        ||||||| ||||||||| |||| |||||||||||||      |||||||    
        cuuuuca uuuucaagu aguc acgggucuacaua      gguuuau   g
acucagua       c         c    a             aauaac       ugu 


Annotation confidence Not enough data
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Genome context
chrX: 114412177-114412287 [+]

Database links

Mature ptr-miR-1298

Accession MIMAT0008017
Description Pan troglodytes ptr-miR-1298 mature miRNA
Sequence 17 - UUCAUUCGGCUGUCCAGAUGUA - 38
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70