Stem-loop ptr-mir-1302-1

Accession

MI0008516

Description

Pan troglodytes ptr-mir-1302-1 precursor miRNA

Gene family

MIPF0000456; mir-1302

Literature search

1 open access papers mention ptr-mir-1302-1
(2 sentences)

Sequence

cagaaagcccaguuaaauuugaauuucaaguaaacaaugaauaauuguguauguaagaauaucccauacaauauUUGGGACAUACUUAUGCUAAAaauuauuccuugcuuaucugaaauucaaauguaacuaggauuccugu
(((.((.((.(((((.((((((((((((.((((.(((.((((((((......(((((.((.(((((.........))))).)).)))))......)))))))).))).)))).)))))))))))).))))).)).)).))).

Structure

-   a  g  c     a            a    a   u        guguau     a  a     uac 
 cag aa cc aguua auuugaauuuca guaa caa gaauaauu      guaag au uccca   a
 ||| || || ||||| |||||||||||| |||| ||| ||||||||      ||||| || |||||   a
 guc uu gg ucaau uaaacuuaaagu uauu guu cuuauuaa      UAUUC UA AGGGU   u
u   c  a  a     g            c    c   c        AAAUCG     A  C     Uua 

Annotation confidence Not enough data

Genome context

chr12: 115824278-115824419 [-]

Mature ptr-miR-1302

• Accession: MIMAT0008021
• Description: Pan troglodytes ptr-miR-1302 mature miRNA
• Sequence: 75 - UUGGGACAUACUUAUGCUAAA - 95
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70