miRBase entry: ptr-mir-153

Stem-loop ptr-mir-153


Accession
MI0008553
Description
Pan troglodytes ptr-mir-153 precursor miRNA
Gene family
MIPF0000050; mir-153


Sequence

agcgguggccagugucauuuuugugauguugcagcuaguaauaugagcccagUUGCAUAGUCACAAAAGUGAUCauuggaaacugu
.(((((..(((((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).))))))..)))))

Structure
a     gg      -             gu       -a  aa 
 gcggu  ccagug ucauuuuugugau  ugcagcu  gu  u
 |||||  |||||| |||||||||||||  |||||||  ||  a
 uguca  gguuaC AGUGAAAACACUG  ACGUUga  cg  u
-     aa      U             AU       cc  ag 


Annotation confidence Not enough data
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Genome context
chr7: 161791994-161792079 [-]

Database links

Mature ptr-miR-153

Accession MIMAT0008047
Description Pan troglodytes ptr-miR-153 mature miRNA
Sequence 53 - UUGCAUAGUCACAAAAGUGAUC - 74
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70