Stem-loop sequence ptr-mir-337

Accession

MI0008624 (change log)

Description

Pan troglodytes miR-337 stem-loop

Gene family

MIPF0000195; mir-337

Stem-loop

   uagucagua uu         -   c   u     c        -   ca 
5'          g  ggggggugg gaa ggc ucaua aggaguug aug  c
            |  ||||||||| ||| ||| ||||| |||||||| |||   
3'          c  uccccuacu cuu ccg aguau uccucgac uau  a
   -------aa -u         u   u   u     a        c   ug 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Pan_tro3.0; GCA_000001515.5): chr14: 86119486-86119577 [+]
• Overlapping transcripts:

  sense

  ENSPTRT00000054349 ; ptr-mir-337-201; exon 1

Clustered miRNAs

< 10kb from ptr-mir-337

• ptr-mir-337: chr14: 86119486-86119577 [+]
• ptr-mir-665: chr14: 86120026-86120096 [+]
• ptr-mir-431: chr14: 86125968-86126080 [+]
• ptr-mir-433: chr14: 86126847-86126938 [+]
• ptr-mir-127: chr14: 86127939-86128035 [+]
• ptr-mir-432: chr14: 86129447-86129539 [+]

Database links

• EntrezGene:MIR337
• miRBase Tracker:MI0008624

Mature sequence ptr-miR-337

• Accession: MIMAT0008105
• Sequence: 60 - cuccuauaugaugccuuucuuc - 81
• Evidence: by similarity; MI0000806
• Predicted targets:
  • TargetScanVert:ptr-miR-337

References

1. PMID:18760970 "Computational identification of novel microRNA homologs in the chimpanzee genome" Baev V, Daskalova E, Minkov I Comput Biol Chem. 33:62-70(2009).