Stem-loop sequence ptr-mir-431

AccessionMI0008666 (change log)
DescriptionPan troglodytes miR-431 stem-loop
Gene family MIPF0000142; mir-431
Stem-loop 
   ----------------cc  c     c       u          c  u a     ----   aca 
5'                   ug uuguc ugcgagg gucuugcagg cg c ugcag    gcc   c
                     || ||||| ||||||| |||||||||| || | |||||    |||    
3'                   ac agcag acgcucu cgggacguuc gc g acguu    ugg   u
   gcagcaaccacuacuccu  -     a       u          u  u g     gcaa   cag
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Pan_tro3.0; GCA_000001515.5) Overlapping transcripts
chr14: 86125968-86126080 [+]
sense
ENSPTRT00000054250 ; ptr-mir-431-201; exon 1
antisense
ENSPTRT00000012391 ; ptr-mir-136-201; exon 2
Clustered miRNAs
< 10kb from ptr-mir-431
ptr-mir-337chr14: 86119486-86119577 [+]
ptr-mir-665chr14: 86120026-86120096 [+]
ptr-mir-431chr14: 86125968-86126080 [+]
ptr-mir-433chr14: 86126847-86126938 [+]
ptr-mir-127chr14: 86127939-86128035 [+]
ptr-mir-432chr14: 86129447-86129539 [+]
ptr-mir-136chr14: 86129665-86129746 [+]
Database links

Mature sequence ptr-miR-431

Accession MIMAT0008145
Sequence

19 -  

ugucuugcaggccgucaugca

 - 39

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Evidence by similarity; MI0001721
Predicted targets

References

1
PMID:18760970 "Computational identification of novel microRNA homologs in the chimpanzee genome" Baev V, Daskalova E, Minkov I Comput Biol Chem. 33:62-70(2009).