miRBase entry: ptr-mir-453

Stem-loop ptr-mir-453


Accession
MI0008677
Description
Pan troglodytes ptr-mir-453 precursor miRNA
Gene family
MIPF0000018; mir-154


Sequence

caggaaugcugcgagcagugccaccucaugguacucggagggAGGUUGUCCGUGGUGAGUUCGCAuuauuuaaugaugc
...(((((.((((((((((((((.....)))))))((((.(.....).))))......))))))).)))))........

Structure
-----cag     c       agugccaccucaugguacu    g g 
        gaaug ugcgagc                   cgga g A
        ||||| |||||||                   |||| | G
        uuuau ACGCUUG                   GCCU U G
cguaguaa     u       -------------AGUGGU    G U 


Annotation confidence Not enough data
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Genome context
chr14: 86304425-86304503 [+]
Clustered miRNAs
17 other miRNAs are < 10 kb from ptr-mir-453
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-453

Accession MIMAT0008155
Description Pan troglodytes ptr-miR-453 mature miRNA
Sequence 43 - AGGUUGUCCGUGGUGAGUUCGCA - 65
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70