miRBase entry: ptr-mir-492

Stem-loop ptr-mir-492


Accession
MI0008689
Description
Pan troglodytes ptr-mir-492 precursor miRNA
Gene family
MIPF0000499; mir-492


Sequence

aacuacagccacuacuacaggaccaucaAGGACCUGCGGGACAAGAUUCUgggugccaccauugagaacgccaggauuguccugcagaucaacaaugcucaacuggcugcagaug
..((.((((((.........((.(((....((.((((((((((..(((((((((.(((....)).).)).))))))))))))))))).))....))).))...)))))).))...

Structure
-aa  a      cuacuacag  c   caAG  C          AG       -  g -  c 
   cu cagcca         ga cau    GA CUGCGGGACA  AUUCUgg gu c ca c
   || ||||||         || |||    || ||||||||||  ||||||| || | ||  
   ga gucggu         cu gua    cu gacguccugu  uaggacc ca g gu a
gua  c      ------caa  c   acaa  a          --       g  a a  u 


Annotation confidence Not enough data
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Genome context
chr12: 97572526-97572640 [+]

Database links

Mature ptr-miR-492

Accession MIMAT0008167
Description Pan troglodytes ptr-miR-492 mature miRNA
Sequence 29 - AGGACCUGCGGGACAAGAUUCU - 50
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70