Stem-loop ptr-mir-548h

Accession

MI0008752

Description

Pan troglodytes ptr-mir-548h precursor miRNA

Gene family

MIPF0000317; mir-548

Literature search

1 open access papers mention ptr-mir-548h
(2 sentences)

Sequence

ucuguccauuaggugggugcAAAAGUAAUCGCGGUUUUUGUCauuacuuuuaaugguaaaaacuggaauuacuuuugcacugaccuaauauuaagccauau
.......(((((((.((((((((((((((..(((((((((((((((....)))))))))))))))..)))))))))))))).)))))))............

Structure

-----ucugucc       g              CG               c 
            auuaggu ggugcAAAAGUAAU  CGGUUUUUGUCauua u
            ||||||| ||||||||||||||  |||||||||||||||  
            uaaucca ucacguuuucauua  gucaaaaaugguaau u
uauaccgaauua       g              ag               u 

Annotation confidence Not enough data

Genome context

chr14: 48448682-48448782 [-]

Mature ptr-miR-548h

• Accession: MIMAT0008222
• Description: Pan troglodytes ptr-miR-548h mature miRNA
• Sequence: 21 - AAAAGUAAUCGCGGUUUUUGUC - 42
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70