miRBase entry: ptr-mir-581

Stem-loop ptr-mir-581


Accession
MI0008791
Description
Pan troglodytes ptr-mir-581 precursor miRNA
Gene family
MIPF0000466; mir-581


Sequence

uuaugugaagguauUCUUGUGUUCUCUAGAUCAGUgcuuuuaggaaauuugugugaucuaaagaacacaaagaauaccuacacagaaccaccugc
...((((.(((((((((((((((((.(((((((..((.............)).))))))).))))))).)))))))))).))))...........

Structure
--------uua    a          -       C       GU  uuuua 
           ugug agguauUCUU GUGUUCU UAGAUCA  gc     g
           |||| |||||||||| ||||||| |||||||  ||     g
           acac uccauaagaa cacaaga aucuagu  ug     a
cguccaccaag    a          a       a       -g  uuuaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr5: 60701124-60701218 [+]

Database links

Mature ptr-miR-581

Accession MIMAT0008254
Description Pan troglodytes ptr-miR-581 mature miRNA
Sequence 15 - UCUUGUGUUCUCUAGAUCAGU - 35
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70