miRBase entry: ptr-mir-583

Stem-loop ptr-mir-583


Accession
MI0008793
Description
Pan troglodytes ptr-mir-583 precursor miRNA
Gene family
MIPF0000482; mir-583


Sequence

aacucacacauuaacCAAAGAGGAAGGUCCCAUUACugcagggaucuuagcaguacugggaccuaccucuuugg
..............(((((((((.((((((((.(((((((((...))).)))))).)))))))).)))))))))

Structure
aacucacacauuaa         A        U      -   g 
              cCAAAGAGG AGGUCCCA UACugc agg  
              ||||||||| |||||||| |||||| ||| a
              gguuucucc uccagggu augacg uuc  
--------------         a        c      a   u 


Annotation confidence Not enough data
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Genome context
chr5: 19391915-19391988 [-]

Database links

Mature ptr-miR-583

Accession MIMAT0008256
Description Pan troglodytes ptr-miR-583 mature miRNA
Sequence 16 - CAAAGAGGAAGGUCCCAUUAC - 36
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70