miRBase entry: ptr-mir-601

Stem-loop ptr-mir-601


Accession
MI0008807
Description
Pan troglodytes ptr-mir-601 precursor miRNA
Gene family
MIPF0000522; mir-601


Sequence

ugcaugaguucaucuUGGUCUAGGAUUGUUGGAGGAGucagaaaaacuaccccagggauccugaaguccuuugggugg
..........(((((.((.((((((((.((((.(((((.......))).)))))).))))))..)).))...))))).

Structure
ugcaugaguu     --U  U  --      G    A  -   ca 
          caucu   GG CU  AGGAUU UUGG GG AGu  g
          |||||   || ||  |||||| |||| || |||  a
          guggg   cc ga  uccuag gacc cc uca  a
---------g     uuu  u  ag      g    -  a   aa 


Annotation confidence Not enough data
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Genome context
chr9: 101480284-101480361 [-]

Database links

Mature ptr-miR-601

Accession MIMAT0008270
Description Pan troglodytes ptr-miR-601 mature miRNA
Sequence 16 - UGGUCUAGGAUUGUUGGAGGAG - 37
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70