miRBase entry: ptr-mir-617

Stem-loop ptr-mir-617


Accession
MI0008816
Description
Pan troglodytes ptr-mir-617 precursor miRNA
Gene family
MIPF0000672; mir-617


Sequence

caucauaaggagccuAGACUUCCCAUUUGAAGGUGGCcauuuccuaccaccuucaaaugguaaguccaggcuccuucugauucaauaaaugaggag
.((((.(((((((((.(((((.((((((((((((((..........)))))))))))))).))))).))))))))).))))...............

Structure
--------------c    u         A     C              Ccau 
               auca aaggagccu GACUU CCAUUUGAAGGUGG    u
               |||| ||||||||| ||||| ||||||||||||||     
               uagu uuccucgga cugaa gguaaacuuccacc    u
gaggaguaaauaacu    c         c     u              aucc 


Annotation confidence Not enough data
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Genome context
chr12: 83252252-83252347 [-]

Database links

Mature ptr-miR-617

Accession MIMAT0008279
Description Pan troglodytes ptr-miR-617 mature miRNA
Sequence 16 - AGACUUCCCAUUUGAAGGUGGC - 37
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70