Stem-loop ptr-mir-619

Accession

MI0008818

Description

Pan troglodytes ptr-mir-619 precursor miRNA

Gene family

MIPF0000557; mir-619

Sequence

cgcccaccucagccucccaaaaugcugggauuacaggcaugagccaccguggucgaccauGACCUGGACAUGUUUGUGCCCAGUacugucaguuugca
.((..((..(((..........(((((((..((((((((((..(((.(((((....)))))...))).))))))))))))))))))))...))..)).

Structure

c  cc  -cu   ccucccaaaa       au          ag   --c     u 
 gc  ac   cag          ugcuggg  uacaggcaug  cca   cgugg c
 ||  ||   |||          |||||||  ||||||||||  |||   |||||  
 cg  ug   guc          aUGACCC  GUGUUUGUAC  GGU   Guacc g
a  uu  acu   ----------       --          -A   CCA     a 

Annotation confidence Not enough data

Genome context

chr12: 111822362-111822459 [-]

Mature ptr-miR-619

• Accession: MIMAT0008281
• Description: Pan troglodytes ptr-miR-619 mature miRNA
• Sequence: 61 - GACCUGGACAUGUUUGUGCCCAGU - 84
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70