miRBase entry: ptr-mir-635

Stem-loop ptr-mir-635


Accession
MI0008829
Description
Pan troglodytes ptr-mir-635 precursor miRNA
Gene family
MIPF0000662; mir-635


Sequence

cagagaggagcugccACUUGGGCACUGAAACAAUGUCCauuaggcuuuguuauggaaacuucuccugaucauuguuuuguguccauugagcuuccaa
......((((((......(((((((.(((((((((...((((((....(((.....)))....))))))))))))))))))))))...))))))...

Structure
cagaga      gccACU       U         UCC      cuuu   a 
      ggagcu      UGGGCAC GAAACAAUG   auuagg    guu u
      ||||||      ||||||| |||||||||   ||||||    ||| g
      cuucga      accugug uuuuguuac   uagucc    caa g
---aac      ---guu       -         ---      ucuu   a 


Annotation confidence Not enough data
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Genome context
chr17: 67849120-67849216 [-]

Database links

Mature ptr-miR-635

Accession MIMAT0008292
Description Pan troglodytes ptr-miR-635 mature miRNA
Sequence 16 - ACUUGGGCACUGAAACAAUGUCC - 38
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70