miRBase entry: ptr-mir-7-1

Stem-loop ptr-mir-7-1


Accession
MI0008853
Description
Pan troglodytes ptr-mir-7-1 precursor miRNA
Gene family
MIPF0000022; mir-7


Sequence

uuggauguuggccuaguucugugUGGAAGACUAGUGAUUUUGUUGUuuuuagauaacuaaaucgacaacaaaucacagucugccauauggcacaggccaugccucuaca
.((((.((((((((.((.((((((((.(((((.(((((((.(((((((((((....)))))..)))))))))))))))))).)))))))).)))))))).)).))))..

Structure
-u    u  -      a  u        A     A       U      --     a 
  ugga gu uggccu gu cugugUGG AGACU GUGAUUU GUUGUu  uuuag u
  |||| || |||||| || |||||||| ||||| ||||||| ||||||  |||||  
  aucu cg accgga ca gguauacc ucuga cacuaaa caacag  aaauc a
ac    c  u      -  c        g     -       -      cu     a 


Annotation confidence Not enough data
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Genome context
chr9: 61289459-61289567 [-]

Database links

Mature ptr-miR-7

Accession MIMAT0002485
Description Pan troglodytes ptr-miR-7 mature miRNA
Sequence 24 - UGGAAGACUAGUGAUUUUGUUGU - 46
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70