miRBase entry: ptr-mir-758

Stem-loop ptr-mir-758


Accession
MI0008857
Description
Pan troglodytes ptr-mir-758 precursor miRNA
Gene family
MIPF0000126; mir-379


Sequence

ccuggauacaugagaugguugaccagagagcacacgcuuuauuugugccgUUUGUGACCUGGUCCACUAACCcucaguaucuaaugc
..(((((((.((((.((((.((((((.(.(((.((((.........).))).)))..))))))).))))...)))))))))))....

Structure
--cc       a    --a    u      a -a   c   - uuu 
    uggauac ugag   uggu gaccag g  gca acg c   a
    ||||||| ||||   |||| |||||| |  ||| ||| |   u
    aucuaug acuc   AUCA CUGGUC C  UGU Ugc g   u
cgua       -    CCA    C      - AG   U   c ugu 


Annotation confidence Not enough data
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Genome context
chr14: 86274527-86274613 [+]
Clustered miRNAs
11 other miRNAs are < 10 kb from ptr-mir-758
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-758

Accession MIMAT0008318
Description Pan troglodytes ptr-miR-758 mature miRNA
Sequence 51 - UUUGUGACCUGGUCCACUAACC - 72
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70