miRBase entry: ptr-mir-936

Stem-loop ptr-mir-936


Accession
MI0008883
Description
Pan troglodytes ptr-mir-936 precursor miRNA
Gene family
MIPF0000517; mir-936


Sequence

ucaaggccacugggACAGUAGAGGGAGGAAUCGCAGaaaucacuccaggagcaacugagagaccuugcuucuacuuuaccagguccugcuggcccag
....(((((.((((((((((((((((((..((.(((...((.......))....))).))..)))).)))))))).......)))))).)))))...

Structure
ucaa     c      -------        -    AA  G   -aaa  ac 
    ggcca ugggAC       AGUAGAGG GAGG  UC CAG    uc  u
    ||||| ||||||       |||||||| ||||  || |||    ||  c
    ccggu guccug       ucaucuuc uucc  ag guc    ag  c
-gac     c      gaccauu        g    ag  a   aacg  ga 


Annotation confidence Not enough data
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Genome context
chr10: 105541068-105541164 [-]

Database links

Mature ptr-miR-936

Accession MIMAT0008343
Description Pan troglodytes ptr-miR-936 mature miRNA
Sequence 15 - ACAGUAGAGGGAGGAAUCGCAG - 36
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70