miRBase entry: tca-mir-281

Stem-loop tca-mir-281


Accession
MI0008925
Description
Tribolium castaneum tca-mir-281 precursor miRNA
Gene family
MIPF0000087; mir-46

Literature search
1 open access papers mention tca-mir-281
(1 sentences)

Sequence

ucgaaaaugAAGAGAGCUAUCCGUCGACAGUauauaauuuacacUGUCAUGGAGUUGCUCUCUUUau
......(((((((((((..(((((.((((((.((.....)).)))))))))))...)))))))))))

Structure
ucgaaa           -UA     C      a  u 
      augAAGAGAGC   UCCGU GACAGU ua a
      |||||||||||   ||||| |||||| || a
      uaUUUCUCUCG   AGGUA CUGUca au u
------           UUG     -      c  u 


Annotation confidence Not enough data
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Genome context
ChLG7: 1524911-1524977 [-]

Database links

Mature tca-miR-281-5p

Accession MIMAT0008384
Description Tribolium castaneum tca-miR-281-5p mature miRNA
Sequence 10 - AAGAGAGCUAUCCGUCGACAGU - 31
Evidence experimental
SOLID [2]
Database links

Mature tca-miR-281-3p

Accession MIMAT0008385
Description Tribolium castaneum tca-miR-281-3p mature miRNA
Sequence 45 - UGUCAUGGAGUUGCUCUCUUU - 65
Evidence experimental
SOLID [2]
Database links

References

  1. PubMed ID: 18651924
    In silico prediction and characterization of microRNAs from red flour beetle (Tribolium castaneum)
    "Singh J, Nagaraju J"
    "Insect Mol Biol (2008) 17:427-436

  2. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696