miRBase entry: dan-mir-312

Stem-loop dan-mir-312


Accession
MI0008959
Description
Drosophila ananassae dan-mir-312 precursor miRNA
Gene family
MIPF0000573; mir-312


Sequence

ggugcgucucuagugcaacucuugguuuuuuauacaagUAUUGCACUUGAGACGGCC
(((.((((((.(((((((..((((..(....)..))))..))))))).)))))))))

Structure
   g      u       cu    gu u 
ggu cgucuc agugcaa  cuug  u u
||| |||||| |||||||  ||||  |  
CCG GCAGAG UCACGUU  gaac  a u
   -      U       AU    au u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold_13266: 4132689-4132745 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from dan-mir-312
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dan-miR-312

Accession MIMAT0008422
Description Drosophila ananassae dan-miR-312 mature miRNA
Sequence 39 - UAUUGCACUUGAGACGGCC - 57
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218