miRBase entry: dan-mir-283

Stem-loop dan-mir-283

Accession

MI0008972

Description

Drosophila ananassae dan-mir-283 precursor miRNA

Gene family

MIPF0000054; mir-216

Sequence

cugauucuuaaaggUAAAUAUCAGCUGGUAAUUCUgggagcuaugccugauuaugaaacacucggaauuucaguugguaucgacuuuuucgaauu
..(((((..((((((..(((((((((((.(((((((((.(.((((......))))...).))))))))))))))))))))..))))))..)))))

Structure

cu     uu      AA           U         a --c    cc 
  gauuc  aaaggU  AUAUCAGCUGG AAUUCUggg g   uaug  u
  |||||  ||||||  ||||||||||| ||||||||| |   ||||   
  uuaag  uuuuca  uaugguugacu uuaaggcuc c   guau  g
--     cu      gc           -         a aaa    ua

Annotation confidence Not enough data

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Genome context

scaffold_12929: 2900391-2900485 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from dan-mir-283

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dan-miR-283

Accession	MIMAT0008437
Description	Drosophila ananassae dan-miR-283 mature miRNA
Sequence	15 - UAAAUAUCAGCUGGUAAUUCU - 35
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218